SEC · CURATION · ORCHESTRATION · EVIDENCE
Sec is Kannabium's AI agent for transforming distributed sources into traceable knowledge, evolutionary analyses, and evidence-oriented scientific products.
01 · CAPABILITIES
Sec separates acquisition, normalization, validation, interpretation, and publication. This sequence keeps facts, inferences, hypotheses, and recommendations in distinct layers.
Receives primary and secondary sources, identifies their function, and prepares provenance-aware records.
Integrates fragmented data to reveal useful relations without turning association into causality.
Connects systematics, phylogeny, homology, orthology, comparative genomics, and metabolite diversification.
Preserves data lineage and makes the path from source to publication auditable.
Turns curated knowledge into observatories, editorial pages, panels, graphs, and SGBD- or API-ready packages.
Challenges extrapolations, confronts sources, and states when a conclusion depends on inference.
Selects authoritative sources and records why each source is relevant to the question.
Reconciles names, identifiers, units, and controlled vocabularies across heterogeneous records.
Distinguishes experimental evidence, review, inference, hypothesis, and recommendation.
Resolves accepted names, synonyms, taxon scope, and classification before biological comparison.
Frames alignments, tree inference, support values, and uncertainty for evolutionary questions.
Compares genes, proteins, orthologs, and genomic regions while preserving version context.
Builds traceable summaries across papers without flattening differences in methods or populations.
Records hypotheses, assumptions, predictions, and tests as distinct scientific objects.
Translates curated entities and relations into schemas, matrices, knowledge graphs, and API-ready records.
Tests outputs for grounding, completeness, consistency, reproducibility, and policy compliance.
Prevents secrets and private context from entering public products by default.
Records runs, inputs, versions, decisions, and publication state for accountable operation.
Turns governed evidence into clear scientific communication for researchers, institutions, and decision-makers.
Maps repeatable sequences from question to source, analysis, review, and delivery.
02 · ORCHESTRATION
Sec acts as a coordinator: it distributes tasks, preserves output contracts, assembles results, and routes the response to human review or governed publication.
Defines the question, organism, domain, time scale, and decision the result should support.
Activates curation, evolution, data, security, product, or QA agents according to the task.
Compares results, checks conflicts, assesses evidence, and keeps uncertainty visible.
Produces an answer, governed record, interface, or structured package with traceability.
GOLDEN RULE
It organizes the path to the source, qualifies how evidence is used, and identifies the distance between what was observed and what is being inferred.
03 · CONNECTORS
Connector targets are governed routes for locating, normalizing, and referencing sources. Activation depends on access, rights, rate limits, versioning, and a defined contract; a connector is not permission to copy data without scope or attribution.
Locates articles, reviews, metadata, authors, identifiers, and bibliographic relations.
source_idpublication_datemethod_scopeConfronts accepted names, synonyms, authors, lineages, and taxonomic identifiers.
taxon_idaccepted_nameclassificationRoutes sequences, assemblies, genes, regions, and comparative records with version context.
accessionsequence_scopeversionConnects proteins, orthology, annotated function, experimental evidence, and evolutionary comparison.
protein_idevidence_codeorthology_relationRelates structures, ligands, residues, conformational states, and predicted models with their limitations.
structure_idexperimental_methodmodel_statusOrganizes compounds, bioactivity, and health indicators without mixing molecule, product, market, and population.
compound_idassay_contextpopulation_scopeResolves DOI metadata, abstracts, full-text links, publication status, and citation context.
doiabstract_statusfull_text_routeConnects raw reads, projects, samples, and study context while respecting controlled-access boundaries.
run_accessionsample_idaccess_policyRelates protein domains, families, conserved regions, and functional interpretation.
domain_idfamily_idannotation_evidenceMaps pathways, reactions, organism context, and molecular processes to biological entities.
pathway_idreaction_idorganism_scopeConnects protein associations while keeping experimental, curated, co-expression, and predicted channels distinct.
protein_pairevidence_channelconfidence_scoreRoutes expression datasets, samples, platforms, study designs, and processing context.
series_idsample_idplatformOrganizes occurrence records, coordinates, observation uncertainty, and taxonomic context.
occurrence_idgeospatial_scopeobservation_qualitySeparates institutional indicators, regulatory records, population scope, and policy interpretation.
indicator_idjurisdictioninterpretive_boundaryConnects accessions, germplasm records, material context, and collection metadata.
accession_idmaterial_typecollection_context04 · FUTURE ARCHITECTURE
Sec is being designed as a modular computational solution. For researchers, buyers, and investors, the value is not only the agent interface: it is the separation between canonical intelligence, installable distribution, domain adapters, and the projects that consume them.
The durable scientific layer: skills, contracts, policies, and registry. This is where the agent's knowledge model and evidence boundaries remain canonical.
{ skills, contracts, policies, registry }An installable product distribution with product metadata, an interface, declared capabilities, versioning, and a controlled activation model.
plugin.manifest(capabilities, interface, version)Adapters connect Kannabium, plant_connectors_core, bibliographic retrieval, and future domains without changing the canonical core.
adapter.connect(source, contract, policy)Projects receive only the distribution they need. Private context is not included by default; access must be explicit, scoped, and governed.
project.consume(plugin, approved_context)ACADEMIC + COMMERCIAL THESIS
Academically, Sec preserves provenance, uncertainty, method, and taxonomic identity. Commercially, the four-layer model creates a clearer route to licensing, integration, controlled deployment, and future domain expansion without distributing private context by default.
05 · CONNECTABLE PRODUCTS
These routes already exist in Kannabium's visual ecosystem. Sec can act as a preparation and routing layer without replacing canonical pages or publishing results without review.
06 · VISUAL IDENTITY
The images below are local visual variations of the Sec mascot. They are editorial and narrative assets; they do not represent scientific data, photographic records, or experimental evidence.
